J3_4V66_032

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GUCGACCCCUAAG*CGAUGGGAAA*UAC

Length

26 nucleotides

Bulged bases

4V66|1|BB|U|1344, 4V66|1|BB|A|1347, 4V66|1|BB|C|1348, 4V66|1|BB|U|1379

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|BB|G|1343
4V66|1|BB|U|1344
4V66|1|BB|C|1345
4V66|1|BB|G|1346
4V66|1|BB|A|1347
4V66|1|BB|C|1348
4V66|1|BB|C|1349
4V66|1|BB|C|1350
4V66|1|BB|C|1351
4V66|1|BB|U|1352
4V66|1|BB|A|1353
4V66|1|BB|A|1354
4V66|1|BB|G|1355
*
4V66|1|BB|C|1376
4V66|1|BB|G|1377
4V66|1|BB|A|1378
4V66|1|BB|U|1379
4V66|1|BB|G|1380
4V66|1|BB|G|1381
4V66|1|BB|G|1382
4V66|1|BB|A|1383
4V66|1|BB|A|1384
4V66|1|BB|A|1385
*
4V66|1|BB|U|1402
4V66|1|BB|A|1403
4V66|1|BB|C|1404

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BM

50S ribosomal protein L23

Chain BN

50S ribosomal protein L2

Chain BV

50S ribosomal protein L34