J3_4V67_073
3D structure
- PDB id
- 4V67 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a translation termination complex formed with release factor RF2.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GC*GUGAAAAGAAC*GAGUGAAAUAGAGCC
- Length
- 28 nucleotides
- Bulged bases
- 4V67|1|DA|U|504, 4V67|1|DA|G|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V67_073 not in the Motif Atlas
- Homologous match to J3_4WF9_011
- Geometric discrepancy: 0.2561
- The information below is about J3_4WF9_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_92134.2
- Basepair signature
- cWW-cWW-cWW-F-tWH-cSS-tSS-tSH-tSH-tWW-tHH-tWH-tWW-F-F-cSS-cSW-F-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
4V67|1|DA|G|30
4V67|1|DA|C|31
*
4V67|1|DA|G|474
4V67|1|DA|U|475
4V67|1|DA|G|476
4V67|1|DA|A|477
4V67|1|DA|A|478
4V67|1|DA|A|479
4V67|1|DA|A|480
4V67|1|DA|G|481
4V67|1|DA|A|482
4V67|1|DA|A|483
4V67|1|DA|C|484
*
4V67|1|DA|G|496
4V67|1|DA|A|497
4V67|1|DA|G|498
4V67|1|DA|U|499
4V67|1|DA|G|500
4V67|1|DA|A|501
4V67|1|DA|A|502
4V67|1|DA|A|503
4V67|1|DA|U|504
4V67|1|DA|A|505
4V67|1|DA|G|506
4V67|1|DA|A|507
4V67|1|DA|G|508
4V67|1|DA|C|509
4V67|1|DA|C|510
Current chains
- Chain DA
- 23S RRNA
Nearby chains
- Chain DU
- 50S ribosomal protein L20
- Chain DW
- 50S ribosomal protein L22
- Chain DX
- 50S ribosomal protein L23
- Chain DY
- 50S ribosomal protein L24
Coloring options: