J3_4V67_083

3D structure

PDB id

4V67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a translation termination complex formed with release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGA*UUUAAAG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V67_083 not in the Motif Atlas

Homologous match to J3_9DFE_009

Geometric discrepancy: 0.2778

The information below is about J3_9DFE_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V67|1|BA|G|1055
4V67|1|BA|G|1056
4V67|1|BA|A|1057
*
4V67|1|BA|U|1081
4V67|1|BA|U|1082
4V67|1|BA|U|1083
4V67|1|BA|A|1084
4V67|1|BA|A|1085
4V67|1|BA|A|1086
4V67|1|BA|G|1087
*
4V67|1|BA|C|1102
4V67|1|BA|A|1103
4V67|1|BA|C|1104

Current chains

Chain BA

23S RRNA

Nearby chains

Chain BK

50S ribosomal protein L11