J3_4V68_034

3D structure

PDB id

4V68 (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.4 Å

Loop

Sequence

GGA*UUUAAAGAGUG*CUCAC

Length

19 nucleotides

Bulged bases

4V68|1|BA|A|1086, 4V68|1|BA|A|1088, 4V68|1|BA|G|1089

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V68|1|BA|G|1055
4V68|1|BA|G|1056
4V68|1|BA|A|1057
*
4V68|1|BA|U|1081
4V68|1|BA|U|1082
4V68|1|BA|U|1083
4V68|1|BA|A|1084
4V68|1|BA|A|1085
4V68|1|BA|A|1086
4V68|1|BA|G|1087
4V68|1|BA|A|1088
4V68|1|BA|G|1089
4V68|1|BA|U|1090
4V68|1|BA|G|1091
*
4V68|1|BA|C|1100
4V68|1|BA|U|1101
4V68|1|BA|C|1102
4V68|1|BA|A|1103
4V68|1|BA|C|1104

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B9

50S ribosomal protein L36

Chain BL

50S ribosomal protein L11