J3_4V69_018

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

GGA*UUUAAAG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V69_018 not in the Motif Atlas

Homologous match to J3_7RQB_006

Geometric discrepancy: 0.493

The information below is about J3_7RQB_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V69|1|BB|G|1055
4V69|1|BB|G|1056
4V69|1|BB|A|1057
*
4V69|1|BB|U|1081
4V69|1|BB|U|1082
4V69|1|BB|U|1083
4V69|1|BB|A|1084
4V69|1|BB|A|1085
4V69|1|BB|A|1086
4V69|1|BB|G|1087
*
4V69|1|BB|C|1102
4V69|1|BB|A|1103
4V69|1|BB|C|1104

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BI

50S ribosomal protein L11