J3_4V6L_003

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

CUUG*CGGAG*CGUUAAG

Length

16 nucleotides

Bulged bases

4V6L|1|AA|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|AA|C|826
4V6L|1|AA|U|827
4V6L|1|AA|U|828
4V6L|1|AA|G|829
*
4V6L|1|AA|C|857
4V6L|1|AA|G|858
4V6L|1|AA|G|859
4V6L|1|AA|A|860
4V6L|1|AA|G|861
*
4V6L|1|AA|C|868
4V6L|1|AA|G|869
4V6L|1|AA|U|870
4V6L|1|AA|U|871
4V6L|1|AA|A|872
4V6L|1|AA|A|873
4V6L|1|AA|G|874

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AF

30S ribosomal protein S2

Chain AI

30S ribosomal protein S5

Chain AL

30S ribosomal protein S8