J3_4V6L_004

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

UGGAG*CUAC*GGAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|AA|U|943
4V6L|1|AA|G|944
4V6L|1|AA|G|945
4V6L|1|AA|A|946
4V6L|1|AA|G|947
*
4V6L|1|AA|C|1234
4V6L|1|AA|U|1235
4V6L|1|AA|A|1236
4V6L|1|AA|C|1237
*
4V6L|1|AA|G|1337
4V6L|1|AA|G|1338
4V6L|1|AA|A|1339
4V6L|1|AA|A|1340

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AE

Transfer RNA; tRNA

Chain AK

30S ribosomal protein S7

Chain AM

30S ribosomal protein S9

Chain AQ

30S ribosomal protein S13