J3_4V6L_028

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

ACAAG*CUAGUAA*UGAAUACGU

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|AA|A|935
4V6L|1|AA|C|936
4V6L|1|AA|A|937
4V6L|1|AA|A|938
4V6L|1|AA|G|939
*
4V6L|1|AA|C|1344
4V6L|1|AA|U|1345
4V6L|1|AA|A|1346
4V6L|1|AA|G|1347
4V6L|1|AA|U|1348
4V6L|1|AA|A|1349
4V6L|1|AA|A|1350
*
4V6L|1|AA|U|1372
4V6L|1|AA|G|1373
4V6L|1|AA|A|1374
4V6L|1|AA|A|1375
4V6L|1|AA|U|1376
4V6L|1|AA|A|1377
4V6L|1|AA|C|1378
4V6L|1|AA|G|1379
4V6L|1|AA|U|1380

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AK

30S ribosomal protein S7

Chain AM

30S ribosomal protein S9