J3_4V6N_023
3D structure
- PDB id
- 4V6N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- CGUCAG*CGCAACCC*GGAUGACG
- Length
- 22 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6N|1|BA|C|1063
4V6N|1|BA|G|1064
4V6N|1|BA|U|1065
4V6N|1|BA|C|1066
4V6N|1|BA|A|1067
4V6N|1|BA|G|1068
*
4V6N|1|BA|C|1107
4V6N|1|BA|G|1108
4V6N|1|BA|C|1109
4V6N|1|BA|A|1110
4V6N|1|BA|A|1111
4V6N|1|BA|C|1112
4V6N|1|BA|C|1113
4V6N|1|BA|C|1114
*
4V6N|1|BA|G|1186
4V6N|1|BA|G|1187
4V6N|1|BA|A|1188
4V6N|1|BA|U|1189
4V6N|1|BA|G|1190
4V6N|1|BA|A|1191
4V6N|1|BA|C|1192
4V6N|1|BA|G|1193
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BE
- 30S ribosomal protein S2
- Chain BF
- 30S ribosomal protein S3
- Chain BH
- 30S ribosomal protein S5
- Chain BJ
- 30S ribosomal protein S7
- Chain BL
- 30S ribosomal protein S9
- Chain BM
- 30S ribosomal protein S10
- Chain BQ
- 30S ribosomal protein S14
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