J3_4V6O_043
3D structure
- PDB id
- 4V6O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 14.7 Å
Loop
- Sequence
- UAUC*GAGACUGC*GAGGAAGGUG
- Length
- 22 nucleotides
- Bulged bases
- 4V6O|1|AA|U|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6O|1|AA|U|1116
4V6O|1|AA|A|1117
4V6O|1|AA|U|1118
4V6O|1|AA|C|1119
*
4V6O|1|AA|G|1154
4V6O|1|AA|A|1155
4V6O|1|AA|G|1156
4V6O|1|AA|A|1157
4V6O|1|AA|C|1158
4V6O|1|AA|U|1159
4V6O|1|AA|G|1160
4V6O|1|AA|C|1161
*
4V6O|1|AA|G|1175
4V6O|1|AA|A|1176
4V6O|1|AA|G|1177
4V6O|1|AA|G|1178
4V6O|1|AA|A|1179
4V6O|1|AA|A|1180
4V6O|1|AA|G|1181
4V6O|1|AA|G|1182
4V6O|1|AA|U|1183
4V6O|1|AA|G|1184
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AE
- 30S ribosomal protein S2
- Chain AF
- 30S ribosomal protein S3
- Chain AJ
- 30S ribosomal protein S7
- Chain AL
- 30S ribosomal protein S9
- Chain AM
- 30S ribosomal protein S10
- Chain AQ
- 30S ribosomal protein S14
Coloring options: