J3_4V6R_012
3D structure
- PDB id
- 4V6R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 11.5 Å
Loop
- Sequence
- CAAUGG*UCGUAGUCC*GUCG
- Length
- 19 nucleotides
- Bulged bases
- 4V6R|1|AA|U|1240
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6R|1|AA|C|1237
4V6R|1|AA|A|1238
4V6R|1|AA|A|1239
4V6R|1|AA|U|1240
4V6R|1|AA|G|1241
4V6R|1|AA|G|1242
*
4V6R|1|AA|U|1295
4V6R|1|AA|C|1296
4V6R|1|AA|G|1297
4V6R|1|AA|U|1298
4V6R|1|AA|A|1299
4V6R|1|AA|G|1300
4V6R|1|AA|U|1301
4V6R|1|AA|C|1302
4V6R|1|AA|C|1303
*
4V6R|1|AA|G|1334
4V6R|1|AA|U|1335
4V6R|1|AA|C|1336
4V6R|1|AA|G|1337
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AD
- Transfer RNA; tRNA
- Chain AJ
- 30S ribosomal protein S7
- Chain AP
- 30S ribosomal protein S13
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