J3_4V6T_007

3D structure

PDB id

4V6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading

Experimental method

ELECTRON MICROSCOPY

Resolution

8.3 Å

Loop

Sequence

GAAG*UGUGCC*GGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6T|1|AA|G|1003
4V6T|1|AA|A|1004
4V6T|1|AA|A|1005
4V6T|1|AA|G|1006
*
4V6T|1|AA|U|1023
4V6T|1|AA|G|1024
4V6T|1|AA|U|1025
4V6T|1|AA|G|1026
4V6T|1|AA|C|1027
4V6T|1|AA|C|1028
*
4V6T|1|AA|G|1033
4V6T|1|AA|G|1034
4V6T|1|AA|A|1035
4V6T|1|AA|A|1036
4V6T|1|AA|C|1037

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AN

30S ribosomal protein S14