J3_4V6T_031
3D structure
- PDB id
- 4V6T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.3 Å
Loop
- Sequence
- GUUUAAUUC*GAAGAACCUUAC*GGCUAC
- Length
- 27 nucleotides
- Bulged bases
- 4V6T|1|AA|A|975, 4V6T|1|AA|G|976
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6T|1|AA|G|954
4V6T|1|AA|U|955
4V6T|1|AA|U|956
4V6T|1|AA|U|957
4V6T|1|AA|A|958
4V6T|1|AA|A|959
4V6T|1|AA|U|960
4V6T|1|AA|U|961
4V6T|1|AA|C|962
*
4V6T|1|AA|G|973
4V6T|1|AA|A|974
4V6T|1|AA|A|975
4V6T|1|AA|G|976
4V6T|1|AA|A|977
4V6T|1|AA|A|978
4V6T|1|AA|C|979
4V6T|1|AA|C|980
4V6T|1|AA|U|981
4V6T|1|AA|U|982
4V6T|1|AA|A|983
4V6T|1|AA|C|984
*
4V6T|1|AA|G|1221
4V6T|1|AA|G|1222
4V6T|1|AA|C|1223
4V6T|1|AA|U|1224
4V6T|1|AA|A|1225
4V6T|1|AA|C|1226
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AJ
- 30S ribosomal protein S10
- Chain AM
- 30S ribosomal protein S13
- Chain AN
- 30S ribosomal protein S14
- Chain AS
- 30S ribosomal protein S19
- Chain AV
- Transfer-messenger RNA; tmRNA; 10Sa RNA; SsrA
- Chain AW
- SsrA-binding protein
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