J3_4V6V_024

3D structure

PDB id

4V6V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tetracycline resistance protein Tet(O) bound to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

9.8 Å

Loop

Sequence

ACAUC*GUA*UUUAAAGU

Length

16 nucleotides

Bulged bases

4V6V|1|BA|A|2518, 4V6V|1|BA|U|2519, 4V6V|1|BA|A|2564

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6V|1|BA|A|2516
4V6V|1|BA|C|2517
4V6V|1|BA|A|2518
4V6V|1|BA|U|2519
4V6V|1|BA|C|2520
*
4V6V|1|BA|G|2545
4V6V|1|BA|U|2546
4V6V|1|BA|A|2547
*
4V6V|1|BA|U|2561
4V6V|1|BA|U|2562
4V6V|1|BA|U|2563
4V6V|1|BA|A|2564
4V6V|1|BA|A|2565
4V6V|1|BA|A|2566
4V6V|1|BA|G|2567
4V6V|1|BA|U|2568

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L13

Chain BO

50S ribosomal protein L14