J3_4V6V_034

3D structure

PDB id

4V6V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tetracycline resistance protein Tet(O) bound to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

9.8 Å

Loop

Sequence

UCGACCC*GGAAA*UA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6V|1|BA|U|1344
4V6V|1|BA|C|1345
4V6V|1|BA|G|1346
4V6V|1|BA|A|1347
4V6V|1|BA|C|1348
4V6V|1|BA|C|1349
4V6V|1|BA|C|1350
*
4V6V|1|BA|G|1381
4V6V|1|BA|G|1382
4V6V|1|BA|A|1383
4V6V|1|BA|A|1384
4V6V|1|BA|A|1385
*
4V6V|1|BA|U|1402
4V6V|1|BA|A|1403

Current chains

Chain BA

23S ribosomal RNA

Nearby chains