J3_4V6Y_006
3D structure
- PDB id
- 4V6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUACG
- Length
- 18 nucleotides
- Bulged bases
- 4V6Y|1|AA|C|1214
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V6Y_006 not in the Motif Atlas
- Geometric match to J3_5J7L_053
- Geometric discrepancy: 0.2829
- The information below is about J3_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76475.2
- Basepair signature
- cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V6Y|1|AA|C|990
4V6Y|1|AA|U|991
4V6Y|1|AA|U|992
4V6Y|1|AA|G|993
4V6Y|1|AA|A|994
4V6Y|1|AA|C|995
4V6Y|1|AA|A|996
4V6Y|1|AA|U|997
*
4V6Y|1|AA|A|1044
4V6Y|1|AA|C|1045
4V6Y|1|AA|A|1046
4V6Y|1|AA|G|1047
*
4V6Y|1|AA|C|1210
4V6Y|1|AA|U|1211
4V6Y|1|AA|U|1212
4V6Y|1|AA|A|1213
4V6Y|1|AA|C|1214
4V6Y|1|AA|G|1215
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AN
- 30S ribosomal protein S14
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