J3_4V6Y_030

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GUAGAAUU*AGGAAUACCGGUGG*CGGC

Length

26 nucleotides

Bulged bases

4V6Y|1|AA|U|723

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6Y|1|AA|G|671
4V6Y|1|AA|U|672
4V6Y|1|AA|A|673
4V6Y|1|AA|G|674
4V6Y|1|AA|A|675
4V6Y|1|AA|A|676
4V6Y|1|AA|U|677
4V6Y|1|AA|U|678
*
4V6Y|1|AA|A|712
4V6Y|1|AA|G|713
4V6Y|1|AA|G|714
4V6Y|1|AA|A|715
4V6Y|1|AA|A|716
4V6Y|1|AA|U|717
4V6Y|1|AA|A|718
4V6Y|1|AA|C|719
4V6Y|1|AA|C|720
4V6Y|1|AA|G|721
4V6Y|1|AA|G|722
4V6Y|1|AA|U|723
4V6Y|1|AA|G|724
4V6Y|1|AA|G|725
*
4V6Y|1|AA|C|732
4V6Y|1|AA|G|733
4V6Y|1|AA|G|734
4V6Y|1|AA|C|735

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AF

30S ribosomal protein S6

Chain AK

30S ribosomal protein S11

Chain AR

30S ribosomal protein S18

Chain BC

50S ribosomal protein L35