J3_4V6Z_031

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

CAAUG*CGUAGUCCGGAUU*AUGAAGUCG

Length

27 nucleotides

Bulged bases

4V6Z|1|AA|U|1240, 4V6Z|1|AA|C|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6Z|1|AA|C|1237
4V6Z|1|AA|A|1238
4V6Z|1|AA|A|1239
4V6Z|1|AA|U|1240
4V6Z|1|AA|G|1241
*
4V6Z|1|AA|C|1296
4V6Z|1|AA|G|1297
4V6Z|1|AA|U|1298
4V6Z|1|AA|A|1299
4V6Z|1|AA|G|1300
4V6Z|1|AA|U|1301
4V6Z|1|AA|C|1302
4V6Z|1|AA|C|1303
4V6Z|1|AA|G|1304
4V6Z|1|AA|G|1305
4V6Z|1|AA|A|1306
4V6Z|1|AA|U|1307
4V6Z|1|AA|U|1308
*
4V6Z|1|AA|A|1329
4V6Z|1|AA|U|1330
4V6Z|1|AA|G|1331
4V6Z|1|AA|A|1332
4V6Z|1|AA|A|1333
4V6Z|1|AA|G|1334
4V6Z|1|AA|U|1335
4V6Z|1|AA|C|1336
4V6Z|1|AA|G|1337

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain AI

30S ribosomal protein S9

Chain AM

30S ribosomal protein S13