3D structure

PDB id
4V71 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)
Experimental method
ELECTRON MICROSCOPY
Resolution
20 Å

Loop

Sequence
CGUCAG*CGCAACCC*GGAUGACG
Length
22 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V71|1|AA|C|1063
4V71|1|AA|G|1064
4V71|1|AA|U|1065
4V71|1|AA|C|1066
4V71|1|AA|A|1067
4V71|1|AA|G|1068
*
4V71|1|AA|C|1107
4V71|1|AA|G|1108
4V71|1|AA|C|1109
4V71|1|AA|A|1110
4V71|1|AA|A|1111
4V71|1|AA|C|1112
4V71|1|AA|C|1113
4V71|1|AA|C|1114
*
4V71|1|AA|G|1186
4V71|1|AA|G|1187
4V71|1|AA|A|1188
4V71|1|AA|U|1189
4V71|1|AA|G|1190
4V71|1|AA|A|1191
4V71|1|AA|C|1192
4V71|1|AA|G|1193

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AB
30S ribosomal protein S2
Chain AC
30S ribosomal protein S3
Chain AE
30S ribosomal protein S5
Chain AI
30S ribosomal protein S9
Chain AJ
30S ribosomal protein S10
Chain AN
30S ribosomal protein S14

Coloring options:

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