3D structure

PDB id
4V73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)
Experimental method
ELECTRON MICROSCOPY
Resolution
15 Å

Loop

Sequence
CAUC*GUA*UUUAAAG
Length
14 nucleotides
Bulged bases
4V73|1|BA|A|2518, 4V73|1|BA|U|2519
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V73_023 not in the Motif Atlas
Homologous match to J3_5J7L_046
Geometric discrepancy: 0.3468
The information below is about J3_5J7L_046
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_32601.5
Basepair signature
cWW-tWH-cHW-F-cWW-tSS-F-cWW
Number of instances in this motif group
4

Unit IDs

4V73|1|BA|C|2517
4V73|1|BA|A|2518
4V73|1|BA|U|2519
4V73|1|BA|C|2520
*
4V73|1|BA|G|2545
4V73|1|BA|U|2546
4V73|1|BA|A|2547
*
4V73|1|BA|U|2561
4V73|1|BA|U|2562
4V73|1|BA|U|2563
4V73|1|BA|A|2564
4V73|1|BA|A|2565
4V73|1|BA|A|2566
4V73|1|BA|G|2567

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BK
50S ribosomal protein L14

Coloring options:


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