3D structure

PDB id
4V74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
UGAUCUA*UGG*CAAA
Length
14 nucleotides
Bulged bases
4V74|1|BA|U|686, 4V74|1|BA|A|792
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V74_014 not in the Motif Atlas
Homologous match to J3_5J7L_038
Geometric discrepancy: 0.1503
The information below is about J3_5J7L_038
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_64189.2
Basepair signature
cWW-tWH-cWW-tSW-F-F-cWW
Number of instances in this motif group
7

Unit IDs

4V74|1|BA|U|683
4V74|1|BA|G|684
4V74|1|BA|A|685
4V74|1|BA|U|686
4V74|1|BA|C|687
4V74|1|BA|U|688
4V74|1|BA|A|689
*
4V74|1|BA|U|773
4V74|1|BA|G|774
4V74|1|BA|G|775
*
4V74|1|BA|C|791
4V74|1|BA|A|792
4V74|1|BA|A|793
4V74|1|BA|A|794

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B2
50S ribosomal protein L34
Chain BC
50S ribosomal protein L2

Coloring options:


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