3D structure

PDB id
4V74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
GGAAG*CGCGAUACAG*CGUAC
Length
20 nucleotides
Bulged bases
4V74|1|BA|U|321
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V74_034 not in the Motif Atlas
Homologous match to J3_5J7L_068
Geometric discrepancy: 0.2372
The information below is about J3_5J7L_068
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_46299.2
Basepair signature
cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW
Number of instances in this motif group
3

Unit IDs

4V74|1|BA|G|297
4V74|1|BA|G|298
4V74|1|BA|A|299
4V74|1|BA|A|300
4V74|1|BA|G|301
*
4V74|1|BA|C|316
4V74|1|BA|G|317
4V74|1|BA|C|318
4V74|1|BA|G|319
4V74|1|BA|A|320
4V74|1|BA|U|321
4V74|1|BA|A|322
4V74|1|BA|C|323
4V74|1|BA|A|324
4V74|1|BA|G|325
*
4V74|1|BA|C|337
4V74|1|BA|G|338
4V74|1|BA|U|339
4V74|1|BA|A|340
4V74|1|BA|C|341

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BE
50S ribosomal protein L4
Chain BU
50S ribosomal protein L24

Coloring options:


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