3D structure

PDB id
4V75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
UAU*AGACUGC*GAGGAAGGUG
Length
20 nucleotides
Bulged bases
4V75|1|AA|U|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V75_031 not in the Motif Atlas
Homologous match to J3_5J7L_054
Geometric discrepancy: 0.2615
The information below is about J3_5J7L_054
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_17791.2
Basepair signature
cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
Number of instances in this motif group
2

Unit IDs

4V75|1|AA|U|1116
4V75|1|AA|A|1117
4V75|1|AA|U|1118
*
4V75|1|AA|A|1155
4V75|1|AA|G|1156
4V75|1|AA|A|1157
4V75|1|AA|C|1158
4V75|1|AA|U|1159
4V75|1|AA|G|1160
4V75|1|AA|C|1161
*
4V75|1|AA|G|1175
4V75|1|AA|A|1176
4V75|1|AA|G|1177
4V75|1|AA|G|1178
4V75|1|AA|A|1179
4V75|1|AA|A|1180
4V75|1|AA|G|1181
4V75|1|AA|G|1182
4V75|1|AA|U|1183
4V75|1|AA|G|1184

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AB
30S ribosomal protein S2
Chain AI
30S ribosomal protein S9
Chain AN
30S ribosomal protein S14

Coloring options:


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