3D structure

PDB id
4V76 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
UGGA*UAC*GGAA
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V76_005 not in the Motif Atlas
Homologous match to J3_5J7L_005
Geometric discrepancy: 0.2535
The information below is about J3_5J7L_005
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_52655.4
Basepair signature
cWW-tSH-cWW-F-cWW-cWW
Number of instances in this motif group
4

Unit IDs

4V76|1|AA|U|943
4V76|1|AA|G|944
4V76|1|AA|G|945
4V76|1|AA|A|946
*
4V76|1|AA|U|1235
4V76|1|AA|A|1236
4V76|1|AA|C|1237
*
4V76|1|AA|G|1337
4V76|1|AA|G|1338
4V76|1|AA|A|1339
4V76|1|AA|A|1340

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain A1
Transfer RNA; tRNA
Chain A3
Transfer RNA; tRNA
Chain AG
30S ribosomal protein S7
Chain AI
30S ribosomal protein S9
Chain AM
30S ribosomal protein S13

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.3313 s
Application loaded.