J3_4V76_019

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CAAG*CCCAAAC*GUG

Length

14 nucleotides

Bulged bases

4V76|1|BA|A|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V76_019 not in the Motif Atlas

Homologous match to J3_7RQB_008

Geometric discrepancy: 0.2113

The information below is about J3_7RQB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_16623.1

Basepair signature

cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

4V76|1|BA|C|1306
4V76|1|BA|A|1307
4V76|1|BA|A|1308
4V76|1|BA|G|1309
*
4V76|1|BA|C|1605
4V76|1|BA|C|1606
4V76|1|BA|C|1607
4V76|1|BA|A|1608
4V76|1|BA|A|1609
4V76|1|BA|A|1610
4V76|1|BA|C|1611
*
4V76|1|BA|G|1620
4V76|1|BA|U|1621
4V76|1|BA|G|1622

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34