3D structure

PDB id
4V76 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
GGAAG*CGCGAUACAG*CGUAC
Length
20 nucleotides
Bulged bases
4V76|1|BA|U|321
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V76_035 not in the Motif Atlas
Homologous match to J3_5J7L_068
Geometric discrepancy: 0.1973
The information below is about J3_5J7L_068
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_46299.2
Basepair signature
cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW
Number of instances in this motif group
3

Unit IDs

4V76|1|BA|G|297
4V76|1|BA|G|298
4V76|1|BA|A|299
4V76|1|BA|A|300
4V76|1|BA|G|301
*
4V76|1|BA|C|316
4V76|1|BA|G|317
4V76|1|BA|C|318
4V76|1|BA|G|319
4V76|1|BA|A|320
4V76|1|BA|U|321
4V76|1|BA|A|322
4V76|1|BA|C|323
4V76|1|BA|A|324
4V76|1|BA|G|325
*
4V76|1|BA|C|337
4V76|1|BA|G|338
4V76|1|BA|U|339
4V76|1|BA|A|340
4V76|1|BA|C|341

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BE
50S ribosomal protein L4
Chain BU
50S ribosomal protein L24

Coloring options:


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