J3_4V77_011

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UAU*AGAC*GGUG

Length

11 nucleotides

Bulged bases

4V77|1|AA|U|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V77_011 not in the Motif Atlas

Geometric match to J3_5J7L_010

Geometric discrepancy: 0.2921

The information below is about J3_5J7L_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82365.4

Basepair signature

cWW-F-cWW-cWW-F-F

Number of instances in this motif group

4

Unit IDs

4V77|1|AA|U|1116
4V77|1|AA|A|1117
4V77|1|AA|U|1118
*
4V77|1|AA|A|1155
4V77|1|AA|G|1156
4V77|1|AA|A|1157
4V77|1|AA|C|1158
*
4V77|1|AA|G|1181
4V77|1|AA|G|1182
4V77|1|AA|U|1183
4V77|1|AA|G|1184

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AI

30S ribosomal protein S9