J3_4V77_028

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CAAG*CUAGUAA*UGAAUACG

Length

19 nucleotides

Bulged bases

4V77|1|AA|C|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V77_028 not in the Motif Atlas

Homologous match to J3_4LFB_002

Geometric discrepancy: 0.3621

The information below is about J3_4LFB_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_25303.4

Basepair signature

cWW-F-F-cSS-F-cWW-tWW-F-tWH-F-tHS-cSH-cWW

Number of instances in this motif group

4

Unit IDs

4V77|1|AA|C|936
4V77|1|AA|A|937
4V77|1|AA|A|938
4V77|1|AA|G|939
*
4V77|1|AA|C|1344
4V77|1|AA|U|1345
4V77|1|AA|A|1346
4V77|1|AA|G|1347
4V77|1|AA|U|1348
4V77|1|AA|A|1349
4V77|1|AA|A|1350
*
4V77|1|AA|U|1372
4V77|1|AA|G|1373
4V77|1|AA|A|1374
4V77|1|AA|A|1375
4V77|1|AA|U|1376
4V77|1|AA|A|1377
4V77|1|AA|C|1378
4V77|1|AA|G|1379

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain A3

Transfer RNA; tRNA

Chain AG

30S ribosomal protein S7

Chain AI

30S ribosomal protein S9