3D structure

PDB id
4V7A (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
UG*UGUUG*CGCAA
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V7A_026 not in the Motif Atlas
Homologous match to J3_6CZR_024
Geometric discrepancy: 0.2043
The information below is about J3_6CZR_024
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_04260.1
Basepair signature
cWW-F-F-F-F-F-cWW-cWW
Number of instances in this motif group
2

Unit IDs

4V7A|1|AA|U|1073
4V7A|1|AA|G|1074
*
4V7A|1|AA|U|1083
4V7A|1|AA|G|1084
4V7A|1|AA|U|1085
4V7A|1|AA|U|1086
4V7A|1|AA|G|1087
*
4V7A|1|AA|C|1098
4V7A|1|AA|G|1099
4V7A|1|AA|C|1100
4V7A|1|AA|A|1101
4V7A|1|AA|A|1102

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AB
30S ribosomal protein S2
Chain AE
30S ribosomal protein S5

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1491 s