3D structure

PDB id
4V7B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Visualization of two tRNAs trapped in transit during EF-G-mediated translocation
Experimental method
ELECTRON MICROSCOPY
Resolution
6.8 Å

Loop

Sequence
UAGAAU*GGAAUACCGGUGG*CGG
Length
22 nucleotides
Bulged bases
4V7B|1|AA|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7B|1|AA|U|672
4V7B|1|AA|A|673
4V7B|1|AA|G|674
4V7B|1|AA|A|675
4V7B|1|AA|A|676
4V7B|1|AA|U|677
*
4V7B|1|AA|G|713
4V7B|1|AA|G|714
4V7B|1|AA|A|715
4V7B|1|AA|A|716
4V7B|1|AA|U|717
4V7B|1|AA|A|718
4V7B|1|AA|C|719
4V7B|1|AA|C|720
4V7B|1|AA|G|721
4V7B|1|AA|G|722
4V7B|1|AA|U|723
4V7B|1|AA|G|724
4V7B|1|AA|G|725
*
4V7B|1|AA|C|732
4V7B|1|AA|G|733
4V7B|1|AA|G|734

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AF
30S ribosomal protein S6
Chain AK
30S ribosomal protein S11
Chain AO
30S ribosomal protein S15
Chain AR
30S ribosomal protein S18
Chain AU
30S ribosomal protein S21
Chain AX
messenger RNA
Chain BC
50S ribosomal protein L2

Coloring options:

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