J3_4V7D_018

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GGUGGAUGC*GCGAAAAGAAC*GAGUGAAAAAGAACCUGAAACC

Length

42 nucleotides

Bulged bases

4V7D|1|AA|A|504, 4V7D|1|AA|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7D|1|AA|G|23
4V7D|1|AA|G|24
4V7D|1|AA|U|25
4V7D|1|AA|G|26
4V7D|1|AA|G|27
4V7D|1|AA|A|28
4V7D|1|AA|U|29
4V7D|1|AA|G|30
4V7D|1|AA|C|31
*
4V7D|1|AA|G|474
4V7D|1|AA|C|475
4V7D|1|AA|G|476
4V7D|1|AA|A|477
4V7D|1|AA|A|478
4V7D|1|AA|A|479
4V7D|1|AA|A|480
4V7D|1|AA|G|481
4V7D|1|AA|A|482
4V7D|1|AA|A|483
4V7D|1|AA|C|484
*
4V7D|1|AA|G|496
4V7D|1|AA|A|497
4V7D|1|AA|G|498
4V7D|1|AA|U|499
4V7D|1|AA|G|500
4V7D|1|AA|A|501
4V7D|1|AA|A|502
4V7D|1|AA|A|503
4V7D|1|AA|A|504
4V7D|1|AA|A|505
4V7D|1|AA|G|506
4V7D|1|AA|A|507
4V7D|1|AA|A|508
4V7D|1|AA|C|509
4V7D|1|AA|C|510
4V7D|1|AA|U|511
4V7D|1|AA|G|512
4V7D|1|AA|A|513
4V7D|1|AA|A|514
4V7D|1|AA|A|515
4V7D|1|AA|C|516
4V7D|1|AA|C|517

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain A4

50S ribosomal protein L32

Chain AT

50S ribosomal protein L20

Chain AV

50S ribosomal protein L22

Chain AX

50S ribosomal protein L24