3D structure

PDB id
4V7D (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)
Experimental method
ELECTRON MICROSCOPY
Resolution
7.6 Å

Loop

Sequence
GGAAC*GUUGAUA*UAAUGAACC
Length
21 nucleotides
Bulged bases
4V7D|1|AA|U|2833, 4V7D|1|AA|A|2835, 4V7D|1|AA|U|2884, 4V7D|1|AA|G|2885
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7D|1|AA|G|2811
4V7D|1|AA|G|2812
4V7D|1|AA|A|2813
4V7D|1|AA|A|2814
4V7D|1|AA|C|2815
*
4V7D|1|AA|G|2831
4V7D|1|AA|U|2832
4V7D|1|AA|U|2833
4V7D|1|AA|G|2834
4V7D|1|AA|A|2835
4V7D|1|AA|U|2836
4V7D|1|AA|A|2837
*
4V7D|1|AA|U|2881
4V7D|1|AA|A|2882
4V7D|1|AA|A|2883
4V7D|1|AA|U|2884
4V7D|1|AA|G|2885
4V7D|1|AA|A|2886
4V7D|1|AA|A|2887
4V7D|1|AA|C|2888
4V7D|1|AA|C|2889

Current chains

Chain AA
23S ribosomal RNA

Nearby chains

Chain A4
50S ribosomal protein L32
Chain AE
50S ribosomal protein L3
Chain AQ
50S ribosomal protein L17
Chain AV
50S ribosomal protein L22

Coloring options:

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