J3_4V7D_036

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

CUUGACAUCCA*UGAGACAGGUGC*GCCCUUACG

Length

32 nucleotides

Bulged bases

4V7D|1|BA|U|1049, 4V7D|1|BA|U|1212, 4V7D|1|BA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7D|1|BA|C|990
4V7D|1|BA|U|991
4V7D|1|BA|U|992
4V7D|1|BA|G|993
4V7D|1|BA|A|994
4V7D|1|BA|C|995
4V7D|1|BA|A|996
4V7D|1|BA|U|997
4V7D|1|BA|C|998
4V7D|1|BA|C|999
4V7D|1|BA|A|1000
*
4V7D|1|BA|U|1040
4V7D|1|BA|G|1041
4V7D|1|BA|A|1042
4V7D|1|BA|G|1043
4V7D|1|BA|A|1044
4V7D|1|BA|C|1045
4V7D|1|BA|A|1046
4V7D|1|BA|G|1047
4V7D|1|BA|G|1048
4V7D|1|BA|U|1049
4V7D|1|BA|G|1050
4V7D|1|BA|C|1051
*
4V7D|1|BA|G|1207
4V7D|1|BA|C|1208
4V7D|1|BA|C|1209
4V7D|1|BA|C|1210
4V7D|1|BA|U|1211
4V7D|1|BA|U|1212
4V7D|1|BA|A|1213
4V7D|1|BA|C|1214
4V7D|1|BA|G|1215

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BC

30S ribosomal protein S3

Chain BN

30S ribosomal protein S14

Chain BV

Transfer RNA; tRNA

Chain BZ

Elongation Factor G