J3_4V7M_056

3D structure

PDB id

4V7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of Capreomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

GGUGGA*UAC*GGAAUC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7M|1|CA|G|941
4V7M|1|CA|G|942
4V7M|1|CA|U|943
4V7M|1|CA|G|944
4V7M|1|CA|G|945
4V7M|1|CA|A|946
*
4V7M|1|CA|U|1235
4V7M|1|CA|A|1236
4V7M|1|CA|C|1237
*
4V7M|1|CA|G|1337
4V7M|1|CA|G|1338
4V7M|1|CA|A|1339
4V7M|1|CA|A|1340
4V7M|1|CA|U|1341
4V7M|1|CA|C|1342

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CG

30S ribosomal protein S7

Chain CI

30S ribosomal protein S9

Chain CM

30S ribosomal protein S13

Chain CU

30S ribosomal protein Thx

Chain CX

Transfer RNA; tRNA

Chain CY

Transfer RNA; tRNA