J3_4V7R_024

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

AGAGU*GCAG*UCGAAU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7R|1|C1|A|760
4V7R|1|C1|G|761
4V7R|1|C1|A|762
4V7R|1|C1|G|763
4V7R|1|C1|U|764
*
4V7R|1|C1|G|772
4V7R|1|C1|C|773
4V7R|1|C1|A|774
4V7R|1|C1|G|775
*
4V7R|1|C1|U|785
4V7R|1|C1|C|786
4V7R|1|C1|G|787
4V7R|1|C1|A|788
4V7R|1|C1|A|789
4V7R|1|C1|U|790

Current chains

Chain C1

18S ribosomal RNA

Nearby chains

Chain CE

40S ribosomal protein S9-A