J3_4V7R_064

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

UG*UGUCUG*CGAUAA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7R|1|C1|U|1293
4V7R|1|C1|G|1294
*
4V7R|1|C1|U|1303
4V7R|1|C1|G|1304
4V7R|1|C1|U|1305
4V7R|1|C1|C|1306
4V7R|1|C1|U|1307
4V7R|1|C1|G|1308
*
4V7R|1|C1|C|1317
4V7R|1|C1|G|1318
4V7R|1|C1|A|1319
4V7R|1|C1|U|1320
4V7R|1|C1|A|1321
4V7R|1|C1|A|1322

Current chains

Chain C1

18S ribosomal RNA

Nearby chains

Chain CA

40S ribosomal protein S0-A

Chain CB

40S ribosomal protein S2