3D structure

PDB id
4V7Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CUUG*CAG*CUUACG
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V7Y_005 not in the Motif Atlas
Geometric match to J3_4LFB_005
Geometric discrepancy: 0.1922
The information below is about J3_4LFB_005
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_82572.1
Basepair signature
cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
Number of instances in this motif group
2

Unit IDs

4V7Y|1|AA|C|990
4V7Y|1|AA|U|991
4V7Y|1|AA|U|992
4V7Y|1|AA|G|993
*
4V7Y|1|AA|C|1045
4V7Y|1|AA|A|1046
4V7Y|1|AA|G|1047
*
4V7Y|1|AA|C|1210
4V7Y|1|AA|U|1211
4V7Y|1|AA|U|1212
4V7Y|1|AA|A|1213
4V7Y|1|AA|C|1214
4V7Y|1|AA|G|1215

Current chains

Chain AA
16S rRNA

Nearby chains

Chain AN
30S ribosomal protein S14

Coloring options:


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