J3_4V8J_037

3D structure

PDB id

4V8J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G347U.

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GUCGUCAG*CGCAACC*GACGACGUC

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8J|1|AA|G|1043
4V8J|1|AA|U|1044
4V8J|1|AA|C|1045
4V8J|1|AA|G|1046
4V8J|1|AA|U|1047
4V8J|1|AA|C|1048
4V8J|1|AA|A|1049
4V8J|1|AA|G|1050
*
4V8J|1|AA|C|1089
4V8J|1|AA|G|1090
4V8J|1|AA|C|1091
4V8J|1|AA|A|1092
4V8J|1|AA|A|1093
4V8J|1|AA|C|1094
4V8J|1|AA|C|1095
*
4V8J|1|AA|G|1168
4V8J|1|AA|A|1169
4V8J|1|AA|C|1170
4V8J|1|AA|G|1171
4V8J|1|AA|A|1172
4V8J|1|AA|C|1173
4V8J|1|AA|G|1174
4V8J|1|AA|U|1175
4V8J|1|AA|C|1176

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AC

30S ribosomal protein S3

Chain AE

30S ribosomal protein S5

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10

Chain AN

30S ribosomal protein S14