J3_4V91_012
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAAAUUUGAAAU*AGUUGUAAUUUGGAG*CGAAG
- Length
- 32 nucleotides
- Bulged bases
- 4V91|1|1|U|117, 4V91|1|1|G|120, 4V91|1|1|A|121, 4V91|1|1|U|147, 4V91|1|1|G|156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V91|1|1|C|113
4V91|1|1|A|114
4V91|1|1|A|115
4V91|1|1|A|116
4V91|1|1|U|117
4V91|1|1|U|118
4V91|1|1|U|119
4V91|1|1|G|120
4V91|1|1|A|121
4V91|1|1|A|122
4V91|1|1|A|123
4V91|1|1|U|124
*
4V91|1|1|A|144
4V91|1|1|G|145
4V91|1|1|U|146
4V91|1|1|U|147
4V91|1|1|G|148
4V91|1|1|U|149
4V91|1|1|A|150
4V91|1|1|A|151
4V91|1|1|U|152
4V91|1|1|U|153
4V91|1|1|U|154
4V91|1|1|G|155
4V91|1|1|G|156
4V91|1|1|A|157
4V91|1|1|G|158
*
4V91|1|1|C|263
4V91|1|1|G|264
4V91|1|1|A|265
4V91|1|1|A|266
4V91|1|1|G|267
Current chains
- Chain 1
- 25S RRNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain G
- EL8
- Chain L
- EL13
- Chain N
- EL15
- Chain h
- UL29
- Chain i
- EL36
Coloring options: