J3_4V91_028
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGAUGG*CGUUUCAAAGGCCU*AGGCCACCAU
- Length
- 30 nucleotides
- Bulged bases
- 4V91|1|1|C|1556, 4V91|1|1|A|1558, 4V91|1|1|C|1581
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V91|1|1|A|1537
4V91|1|1|G|1538
4V91|1|1|A|1539
4V91|1|1|U|1540
4V91|1|1|G|1541
4V91|1|1|G|1542
*
4V91|1|1|C|1551
4V91|1|1|G|1552
4V91|1|1|U|1553
4V91|1|1|U|1554
4V91|1|1|U|1555
4V91|1|1|C|1556
4V91|1|1|A|1557
4V91|1|1|A|1558
4V91|1|1|A|1559
4V91|1|1|G|1560
4V91|1|1|G|1561
4V91|1|1|C|1562
4V91|1|1|C|1563
4V91|1|1|U|1564
*
4V91|1|1|A|1575
4V91|1|1|G|1576
4V91|1|1|G|1577
4V91|1|1|C|1578
4V91|1|1|C|1579
4V91|1|1|A|1580
4V91|1|1|C|1581
4V91|1|1|C|1582
4V91|1|1|A|1583
4V91|1|1|U|1584
Current chains
- Chain 1
- 25S RRNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain A
- UL2
- Chain G
- EL8
- Chain N
- EL15
- Chain X
- UL23
- Chain j
- EL37
Coloring options: