J3_4V92_011
3D structure
- PDB id
- 4V92 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGA*UAAUA*UA
- Length
- 10 nucleotides
- Bulged bases
- 4V92|1|A2|U|864
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V92_011 not in the Motif Atlas
- Geometric match to J3_4V88_080
- Geometric discrepancy: 0.1681
- The information below is about J3_4V88_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_56052.3
- Basepair signature
- cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
4V92|1|A2|U|633
4V92|1|A2|G|634
4V92|1|A2|A|635
*
4V92|1|A2|U|861
4V92|1|A2|A|862
4V92|1|A2|A|863
4V92|1|A2|U|864
4V92|1|A2|A|865
*
4V92|1|A2|U|965
4V92|1|A2|A|966
Current chains
- Chain A2
- 18S RRNA
Nearby chains
- Chain BH
- ES7
- Chain BL
- US17
- Chain BW
- US8
- Chain BX
- US12
Coloring options: