J3_4V92_013
3D structure
- PDB id
- 4V92 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUA*UUACG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 4V92|1|A2|A|1093
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V92_013 not in the Motif Atlas
- Homologous match to J3_8P9A_075
- Geometric discrepancy: 0.1488
- The information below is about J3_8P9A_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_94999.1
- Basepair signature
- cWW-tWW-cWW-tWW-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
4V92|1|A2|C|1037
4V92|1|A2|U|1038
4V92|1|A2|A|1039
*
4V92|1|A2|U|1079
4V92|1|A2|U|1080
4V92|1|A2|A|1081
4V92|1|A2|C|1082
4V92|1|A2|G|1083
*
4V92|1|A2|C|1090
4V92|1|A2|A|1091
4V92|1|A2|A|1092
4V92|1|A2|A|1093
4V92|1|A2|G|1094
Current chains
- Chain A2
- 18S RRNA
Nearby chains
- Chain BC
- US5
- Chain BV
- ES21
- Chain BW
- US8
- Chain Ba
- ES26
Coloring options: