3D structure

PDB id
4V97 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the bacterial ribosome ram mutation G299A.
Experimental method
X-RAY DIFFRACTION
Resolution
3.52 Å

Loop

Sequence
CGUAAG*CGG*UCAG
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V97_011 not in the Motif Atlas
Homologous match to J3_7RQB_007
Geometric discrepancy: 0.106
The information below is about J3_7RQB_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_32852.3
Basepair signature
cWW-tSH-tHW-F-F-cWW-cWW-F
Number of instances in this motif group
4

Unit IDs

4V97|1|BA|C|1298
4V97|1|BA|G|1299
4V97|1|BA|U|1300
4V97|1|BA|A|1301
4V97|1|BA|A|1302
4V97|1|BA|G|1303
*
4V97|1|BA|C|1625
4V97|1|BA|G|1626
4V97|1|BA|G|1627
*
4V97|1|BA|U|1639
4V97|1|BA|C|1640
4V97|1|BA|A|1641
4V97|1|BA|G|1642

Current chains

Chain BA
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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