J3_4V97_011

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

CGUAAG*CGG*UCAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V97_011 not in the Motif Atlas

Homologous match to J3_7RQB_007

Geometric discrepancy: 0.106

The information below is about J3_7RQB_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.3

Basepair signature

cWW-tSH-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

4

Unit IDs

4V97|1|BA|C|1298
4V97|1|BA|G|1299
4V97|1|BA|U|1300
4V97|1|BA|A|1301
4V97|1|BA|A|1302
4V97|1|BA|G|1303
*
4V97|1|BA|C|1625
4V97|1|BA|G|1626
4V97|1|BA|G|1627
*
4V97|1|BA|U|1639
4V97|1|BA|C|1640
4V97|1|BA|A|1641
4V97|1|BA|G|1642

Current chains

Chain BA

23S rRNA

Nearby chains