J3_4V9A_029

3D structure

PDB id

4V9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 70S ribosome with tetracycline.

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CAGGAUG*CAUUUAAAGAGUG*CUCACUG

Length

27 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9A|1|DA|C|1053
4V9A|1|DA|A|1054
4V9A|1|DA|G|1055
4V9A|1|DA|G|1056
4V9A|1|DA|A|1057
4V9A|1|DA|U|1058
4V9A|1|DA|G|1059
*
4V9A|1|DA|C|1079
4V9A|1|DA|A|1080
4V9A|1|DA|U|1081
4V9A|1|DA|U|1082
4V9A|1|DA|U|1083
4V9A|1|DA|A|1084
4V9A|1|DA|A|1085
4V9A|1|DA|A|1086
4V9A|1|DA|G|1087
4V9A|1|DA|A|1088
4V9A|1|DA|G|1089
4V9A|1|DA|U|1090
4V9A|1|DA|G|1091
*
4V9A|1|DA|C|1100
4V9A|1|DA|U|1101
4V9A|1|DA|C|1102
4V9A|1|DA|A|1103
4V9A|1|DA|C|1104
4V9A|1|DA|U|1105
4V9A|1|DA|G|1106

Current chains

Chain DA

23S ribosomal RNA

Nearby chains