J3_4V9C_013

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CAAGG*CCCCAAAC*GUG

Length

16 nucleotides

Bulged bases

4V9C|1|BA|A|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9C|1|BA|C|1306
4V9C|1|BA|A|1307
4V9C|1|BA|A|1308
4V9C|1|BA|G|1309
4V9C|1|BA|G|1310
*
4V9C|1|BA|C|1604
4V9C|1|BA|C|1605
4V9C|1|BA|C|1606
4V9C|1|BA|C|1607
4V9C|1|BA|A|1608
4V9C|1|BA|A|1609
4V9C|1|BA|A|1610
4V9C|1|BA|C|1611
*
4V9C|1|BA|G|1620
4V9C|1|BA|U|1621
4V9C|1|BA|G|1622

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34