J3_4V9C_036

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GC*GGAAUAUUG*CAGC

Length

15 nucleotides

Bulged bases

4V9C|1|AA|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9C|1|AA|G|46
4V9C|1|AA|C|47
*
4V9C|1|AA|G|361
4V9C|1|AA|G|362
4V9C|1|AA|A|363
4V9C|1|AA|A|364
4V9C|1|AA|U|365
4V9C|1|AA|A|366
4V9C|1|AA|U|367
4V9C|1|AA|U|368
4V9C|1|AA|G|369
*
4V9C|1|AA|C|392
4V9C|1|AA|A|393
4V9C|1|AA|G|394
4V9C|1|AA|C|395

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AL

30S ribosomal protein S12

Chain AP

30S ribosomal protein S16

Chain DH

50S ribosomal protein L9