J3_4V9C_043

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGUGGA*UAC*GGAAUC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9C|1|AA|G|941
4V9C|1|AA|G|942
4V9C|1|AA|U|943
4V9C|1|AA|G|944
4V9C|1|AA|G|945
4V9C|1|AA|A|946
*
4V9C|1|AA|U|1235
4V9C|1|AA|A|1236
4V9C|1|AA|C|1237
*
4V9C|1|AA|G|1337
4V9C|1|AA|G|1338
4V9C|1|AA|A|1339
4V9C|1|AA|A|1340
4V9C|1|AA|U|1341
4V9C|1|AA|C|1342

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain AI

30S ribosomal protein S9

Chain AM

30S ribosomal protein S13

Chain AV

Transfer RNA; tRNA