J3_4V9C_053

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGGGGACG*CC*GAAAAGCCU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9C|1|BA|G|1422
4V9C|1|BA|G|1423
4V9C|1|BA|G|1424
4V9C|1|BA|G|1425
4V9C|1|BA|G|1426
4V9C|1|BA|A|1427
4V9C|1|BA|C|1428
4V9C|1|BA|G|1429
*
4V9C|1|BA|C|1564
4V9C|1|BA|C|1565
*
4V9C|1|BA|G|1568
4V9C|1|BA|A|1569
4V9C|1|BA|A|1570
4V9C|1|BA|A|1571
4V9C|1|BA|A|1572
4V9C|1|BA|G|1573
4V9C|1|BA|C|1574
4V9C|1|BA|C|1575
4V9C|1|BA|U|1576

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L2