3D structure

PDB id
4V9C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Allosteric control of the ribosome by small-molecule antibiotics
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
GGUAGAAUUCC*GGAGGAAUACCGGUGG*CGGCC
Length
32 nucleotides
Bulged bases
4V9C|1|CA|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V9C|1|CA|G|670
4V9C|1|CA|G|671
4V9C|1|CA|U|672
4V9C|1|CA|A|673
4V9C|1|CA|G|674
4V9C|1|CA|A|675
4V9C|1|CA|A|676
4V9C|1|CA|U|677
4V9C|1|CA|U|678
4V9C|1|CA|C|679
4V9C|1|CA|C|680
*
4V9C|1|CA|G|710
4V9C|1|CA|G|711
4V9C|1|CA|A|712
4V9C|1|CA|G|713
4V9C|1|CA|G|714
4V9C|1|CA|A|715
4V9C|1|CA|A|716
4V9C|1|CA|U|717
4V9C|1|CA|A|718
4V9C|1|CA|C|719
4V9C|1|CA|C|720
4V9C|1|CA|G|721
4V9C|1|CA|G|722
4V9C|1|CA|U|723
4V9C|1|CA|G|724
4V9C|1|CA|G|725
*
4V9C|1|CA|C|732
4V9C|1|CA|G|733
4V9C|1|CA|G|734
4V9C|1|CA|C|735
4V9C|1|CA|C|736

Current chains

Chain CA
16S ribosomal RNA

Nearby chains

Chain CF
30S ribosomal protein S6
Chain CK
30S ribosomal protein S11
Chain CO
30S ribosomal protein S15
Chain CR
30S ribosomal protein S18
Chain CU
30S ribosomal protein S21
Chain DC
50S ribosomal protein L2

Coloring options:

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