J3_4V9C_065

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUCGUCAG*CGCAACC*GAUGACGUC

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9C|1|CA|G|1061
4V9C|1|CA|U|1062
4V9C|1|CA|C|1063
4V9C|1|CA|G|1064
4V9C|1|CA|U|1065
4V9C|1|CA|C|1066
4V9C|1|CA|A|1067
4V9C|1|CA|G|1068
*
4V9C|1|CA|C|1107
4V9C|1|CA|G|1108
4V9C|1|CA|C|1109
4V9C|1|CA|A|1110
4V9C|1|CA|A|1111
4V9C|1|CA|C|1112
4V9C|1|CA|C|1113
*
4V9C|1|CA|G|1187
4V9C|1|CA|A|1188
4V9C|1|CA|U|1189
4V9C|1|CA|G|1190
4V9C|1|CA|A|1191
4V9C|1|CA|C|1192
4V9C|1|CA|G|1193
4V9C|1|CA|U|1194
4V9C|1|CA|C|1195

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CC

30S ribosomal protein S3

Chain CE

30S ribosomal protein S5

Chain CI

30S ribosomal protein S9

Chain CJ

30S ribosomal protein S10

Chain CN

30S ribosomal protein S14